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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922994.1_cds_XP_016471716.1_64022
CDS Infomation

[gene=LOC107793791] [db_xref=GeneID:107793791] [protein=2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial-like] [partial=3'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016471716.1] [location=complement(join(<8775..8905,9454..9639,9741..9880,10045..10156,10247..10346,10429..10586,10686..10868,11036..11173,12686..12910))] [gbkey=CDS]
Sequence

ATGGCAAATTGGGTTGTAAGATCAAGAAGCTGGTTAAATCATTTTGTACTAAGCTCAAGG
AGGACTAGCTGTAGTGGCATTTTAAGAAAGCAGCCGGTGGCTTTTTCCGGCGAGTCTACC
ACCGTACTTGTATCAAGACGTTTCGATTCCATTGAAGCTGGACAGAAACTGGATCCATGC
AGTTATGAAGAGGATTATCATAGTGACACTGCTCACGAAAATCAGGATTTAGATTTTCCA
GGTGGGAAAATTCCATTAACATCAGAGATGAAGTTTATTTCAGAGGCATCCGATATAAGA
TTGCCATGTTATCGAGTTCTAAATGATGATGGCTCTCTAATTTCCGATAGTATATATGAG
CAGGTAGGGCAAGAACTGGCTGTGAACATGTACACTGCTATGGTTACTCTTAAGACTATG
GACACATTCCTTTATGAAGCACAAAGGCAAGGCAGAATTTCCTTCTATATGACTTGTTGT
GGTGAAGAAGCCATCAATATTGCATCTGCTGCTGCTCTATCTCCACATGACTTTGTATTA
CCTCAATATCGAGAATCCGGGGTCTTATTGTGGCGTGGCTTCACCGTGCAAGAATGTACC
AACCAGTGTTTTGGGAATAAGGATGATAAAGGAAAAGGCAGACAAATGCCAGTACATTAT
GGTTCCAAGAAACACAATGTTATAACCATCTCTTCACCTTTGGCCACTCAGATATCTCAG
GCTGCTGGTGTGGCTTATTCTCTAAAAATGGATAAAAGAGGGGCATGTACCGTTGTTTAT
ACAGGGGAGGGTGGAACCAGTGAGGGAGATTTTCATGCTGGATTGAACTTCGCAGCAGTT
ATGGAAGCTCCTGTTATCTTCATATGCCGGAATAATGGATGGGCCATAAGCACCCCTGTA
TATGAACAGTTCCGAAGCGATGGCATTGTGACAAAGGGAATAGGTTATGGAATAAGGAGT
ATTCGCGTAGATGGAAATGATGCTATTGCTGTTTATAGTGCTATTCATGCAGCTCGGAAT
ATGGCAATCAATGAGAACAGACCAATATTAGTTGAGGCAATGACTTATCGAGTAGGACAC
CATTCGACATCTGATGATTCCACGAGGTATCGGCCAACAAACGAAATAGAATACTGGAAA
ACAGCCAGAAGTCCCATTGCCAGATTCAGAAAATGGATTCAGAGAAATGGTTGGTGGAGT
GATGACAAGGAATCTGAACTCTACAGAAATACCAAGAAACAGGTACTGCAGGCAATTGAA
AGAGCAGAGAAAATGGAAAAACCTCCATTGACAGAATTGTTTACAGATGTATATGACCAG
ATGTTACCCAACCTCCAAGAGCAAGAGAGGTCTCTTAGAGATACATTCAAGAA

Peptide Sequence

PEP ID

XP_016471716.1
PEP Infomation

PREDICTED: 2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial-like [Nicotiana tabacum]
Sequence

MANWVVRSRSWLNHFVLSSRRTSCSGILRKQPVAFSGESTTVLVSRRFDSIEAGQKLDPC
SYEEDYHSDTAHENQDLDFPGGKIPLTSEMKFISEASDIRLPCYRVLNDDGSLISDSIYE
QVGQELAVNMYTAMVTLKTMDTFLYEAQRQGRISFYMTCCGEEAINIASAAALSPHDFVL
PQYRESGVLLWRGFTVQECTNQCFGNKDDKGKGRQMPVHYGSKKHNVITISSPLATQISQ
AAGVAYSLKMDKRGACTVVYTGEGGTSEGDFHAGLNFAAVMEAPVIFICRNNGWAISTPV
YEQFRSDGIVTKGIGYGIRSIRVDGNDAIAVYSAIHAARNMAINENRPILVEAMTYRVGH
HSTSDDSTRYRPTNEIEYWKTARSPIARFRKWIQRNGWWSDDKESELYRNTKKQVLQAIE
RAEKMEKPPLTELFTDVYDQMLPNLQEQERSLRDTFKKHSTDYPTDVHV

Transcript Sequence

Gene sequence data has not been registered.